STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hgdCActivator of (R)-2-hydroxyglutaryl-CoA dehydratase. (1432 aa)    
Predicted Functional Partners:
fldI_3
R-phenyllactate dehydratase activator.
 
   
0.734
bcrC_2
benzoyl-CoA reductase subunit C.
  
 
 0.709
AQS02414.1
Hypothetical protein.
 
     0.666
AQR99458.1
Hypothetical protein.
 
     0.651
fldI_1
R-phenyllactate dehydratase activator.
 
   
0.637
AQS00956.1
Tetratricopeptide repeat protein.
       0.624
pyk_1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.594
pyk_2
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
  
 0.594
adhE_1
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.465
gluP
Rhomboid protease GluP.
       0.459
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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