Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQR99812.1 | yjeH | CSACC_16210 | CSACC_27980 | Hypothetical protein. | Inner membrane protein YjeH. | 0.637 |
AQS00970.1 | yjeH | CSACC_27970 | CSACC_27980 | Hypothetical protein. | Inner membrane protein YjeH. | 0.400 |
AQS00972.1 | yjeH | CSACC_27990 | CSACC_27980 | Integrase core domain protein. | Inner membrane protein YjeH. | 0.423 |
AQS02003.1 | amyE | CSACC_38360 | CSACC_41330 | Cyclomaltodextrinase. | Alpha-amylase precursor. | 0.930 |
AQS02003.1 | amyS | CSACC_38360 | CSACC_28090 | Cyclomaltodextrinase. | Alpha-amylase precursor. | 0.900 |
AQS02003.1 | apu | CSACC_38360 | CSACC_43490 | Cyclomaltodextrinase. | Amylopullulanase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.925 |
AQS02003.1 | yjeH | CSACC_38360 | CSACC_27980 | Cyclomaltodextrinase. | Inner membrane protein YjeH. | 0.637 |
amyE | AQS02003.1 | CSACC_41330 | CSACC_38360 | Alpha-amylase precursor. | Cyclomaltodextrinase. | 0.930 |
amyE | amyS | CSACC_41330 | CSACC_28090 | Alpha-amylase precursor. | Alpha-amylase precursor. | 0.915 |
amyE | apu | CSACC_41330 | CSACC_43490 | Alpha-amylase precursor. | Amylopullulanase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.958 |
amyE | yjeH | CSACC_41330 | CSACC_27980 | Alpha-amylase precursor. | Inner membrane protein YjeH. | 0.637 |
amyS | AQS02003.1 | CSACC_28090 | CSACC_38360 | Alpha-amylase precursor. | Cyclomaltodextrinase. | 0.900 |
amyS | amyE | CSACC_28090 | CSACC_41330 | Alpha-amylase precursor. | Alpha-amylase precursor. | 0.915 |
amyS | apu | CSACC_28090 | CSACC_43490 | Alpha-amylase precursor. | Amylopullulanase precursor; Belongs to the glycosyl hydrolase 13 family. | 0.950 |
amyS | yjeH | CSACC_28090 | CSACC_27980 | Alpha-amylase precursor. | Inner membrane protein YjeH. | 0.637 |
apu | AQS02003.1 | CSACC_43490 | CSACC_38360 | Amylopullulanase precursor; Belongs to the glycosyl hydrolase 13 family. | Cyclomaltodextrinase. | 0.925 |
apu | amyE | CSACC_43490 | CSACC_41330 | Amylopullulanase precursor; Belongs to the glycosyl hydrolase 13 family. | Alpha-amylase precursor. | 0.958 |
apu | amyS | CSACC_43490 | CSACC_28090 | Amylopullulanase precursor; Belongs to the glycosyl hydrolase 13 family. | Alpha-amylase precursor. | 0.950 |
apu | yjeH | CSACC_43490 | CSACC_27980 | Amylopullulanase precursor; Belongs to the glycosyl hydrolase 13 family. | Inner membrane protein YjeH. | 0.637 |
yjeH | AQR99812.1 | CSACC_27980 | CSACC_16210 | Inner membrane protein YjeH. | Hypothetical protein. | 0.637 |
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