STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS00993.1Phosphorylated carbohydrates phosphatase. (218 aa)    
Predicted Functional Partners:
AQS00992.1
Hypothetical protein.
       0.545
udk
Uridine kinase.
  
   0.509
ydaF_2
Putative ribosomal N-acetyltransferase YdaF.
      0.502
ptsG_1
PTS system glucose-specific EIICBA component.
  
  
 0.459
bglF
PTS system beta-glucoside-specific EIIBCA component.
  
  
 0.459
sacX
Negative regulator of SacY activity.
  
  
 0.459
lacC_2
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
    0.433
lacC_1
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
    0.429
pgcA_1
Phosphoglucomutase.
   
 
 0.424
pgcA_2
Phosphoglucomutase.
   
 
 0.424
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.