STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01003.1Glycerol-3-phosphate responsive antiterminator. (185 aa)    
Predicted Functional Partners:
AQS00999.1
Hypothetical protein.
 
    0.858
lhgO_2
L-2-hydroxyglutarate oxidase LhgO.
 
     0.844
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
  
  
 0.791
hcnB
Hydrogen cyanide synthase subunit HcnB.
 
    0.788
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
 
  
 0.756
AQR98671.1
ferredoxin--NADP reductase.
 
    0.701
lhgO_1
L-2-hydroxyglutarate oxidase LhgO.
 
     0.692
tmoS_2
Sensor histidine kinase TmoS.
       0.511
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
     
 0.459
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
     
 0.459
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.