STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wecA_1UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase. (213 aa)    
Predicted Functional Partners:
tagA_1
Putative N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
   
 0.805
cap8A_2
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
  
 0.757
AQS02313.1
Glycosyl transferases group 1.
  
  
 0.733
tagA_2
Putative N-acetylmannosaminyltransferase.
   
 0.690
AQS01032.1
Glycosyl transferases group 1.
  
  
 0.679
rfbX_2
Putative O-antigen transporter.
 
  
 0.675
gumH
GDP-mannose:cellobiosyl-diphosphopolyprenol alpha-mannosyltransferase.
 
  
 0.651
ywqD_2
Tyrosine-protein kinase YwqD.
 
  
 0.626
ywqD_1
Tyrosine-protein kinase YwqD.
 
  
 0.621
AQS01028.1
Hypothetical protein.
  
  
 0.589
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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