STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
moaA_2Cyclic pyranopterin monophosphate synthase. (289 aa)    
Predicted Functional Partners:
cynR_5
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
    0.777
AQS02432.1
Stress responsive A/B barrel domain protein.
  
     0.623
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.541
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.541
nasF
uroporphyrinogen-III C-methyltransferase.
  
  
 0.526
AQS01052.1
Hypothetical protein.
       0.504
AQS02594.1
Hypothetical protein.
  
     0.412
mbtB_2
Phenyloxazoline synthase MbtB.
     
 0.409
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.