STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01174.1DNA primase. (869 aa)    
Predicted Functional Partners:
AQS01175.1
Hypothetical protein.
       0.741
AQS01176.1
Hypothetical protein.
       0.741
AQS01180.1
Hypothetical protein.
       0.604
AQS00566.1
Hypothetical protein.
  
     0.550
AQS01181.1
NUMOD4 motif protein.
 
     0.542
dpnA
Modification methylase DpnIIB.
  
    0.513
AQS01177.1
Hypothetical protein.
       0.491
AQS01178.1
Hypothetical protein.
       0.456
AQS01179.1
Hypothetical protein.
       0.456
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.