STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysHPhosphoadenosine phosphosulfate reductase. (340 aa)    
Predicted Functional Partners:
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
 
 0.938
nasF
uroporphyrinogen-III C-methyltransferase.
  
  
 0.839
sir_3
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.793
cysT
Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.
  
  
 0.724
cysW
Sulfate transport system permease protein CysW.
  
  
 0.721
sbp
Sulfate-binding protein precursor.
  
  
 0.721
fbpC2
Fe(3+) ions import ATP-binding protein FbpC 2.
  
  
 0.706
sir_1
Sulfite reductase.
  
  
 0.672
sir_2
Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
  
 0.672
AQS00221.1
Hypothetical protein.
  
   0.645
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.