STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01230.1Hypothetical protein. (81 aa)    
Predicted Functional Partners:
AQS01229.1
Hypothetical protein.
       0.822
niaX
Niacin transporter NiaX.
 
     0.702
AQS02180.1
Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.689
MreD
Rod shape-determining protein MreD.
  
     0.679
AQR98673.1
Endodeoxyribonuclease RusA.
  
     0.652
AQS02168.1
Helix-turn-helix domain protein.
  
     0.629
AQR99626.1
Ribosomal protein L7Ae family protein.
  
     0.610
AQR98278.1
Hypothetical protein.
  
     0.593
AQS02617.1
Replication initiation and membrane attachment.
  
     0.592
AQR99416.1
Tetratricopeptide repeat protein.
  
     0.580
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.