STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lon2_1Lon protease 2. (551 aa)    
Predicted Functional Partners:
AQS00870.1
Stage III sporulation protein SpoAB.
  
    0.769
AQS00868.1
Stage III sporulation protein AC/AD protein family protein.
  
    0.686
ytfJ
Putative spore protein YtfJ.
  
    0.653
spoIIIAE
Stage III sporulation protein AE precursor.
  
    0.630
spoIIM
Stage II sporulation protein M.
  
    0.628
lon1
Lon protease 1; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
 
  
0.562
AQR98310.1
Hypothetical protein.
  
     0.555
YqfC
YabP family protein.
  
     0.553
YyaC3
Hypothetical protein.
 
     0.548
AQS00418.1
Membrane protein of unknown function.
  
     0.538
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.