STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01459.1Small, acid-soluble spore protein beta. (68 aa)    
Predicted Functional Partners:
AQS00869.1
Stage III sporulation protein AC/AD protein family protein.
  
     0.709
gpr_1
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.702
tepA
Translocation-enhancing protein TepA.
  
     0.686
spoVAD_1
Stage V sporulation protein AD.
  
  
 0.683
SpoIIIAA
Hypothetical protein; Transcription termination factor Rho.
  
   
 0.678
YqfD
Putative stage IV sporulation protein YqfD.
 
     0.675
spoIIIAE
Stage III sporulation protein AE precursor.
  
     0.673
SpoVAC1
SpoVA protein.
  
  
 0.665
AQS00868.1
Stage III sporulation protein AC/AD protein family protein.
  
     0.665
ylbJ
Sporulation integral membrane protein YlbJ.
  
     0.662
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.