STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mntR_2Transcriptional regulator MntR. (154 aa)    
Predicted Functional Partners:
mntH_2
Divalent metal cation transporter MntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.
 
  
 0.673
metN
Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.601
znuB
High-affinity zinc uptake system membrane protein ZnuB.
  
  
 0.442
bcrC_1-2
Undecaprenyl pyrophosphate phosphatase.
       0.436
perR_1
Transcriptional regulator PerR; Belongs to the Fur family.
  
  
 0.434
zupT
Zinc transporter ZupT.
  
  
 0.434
fur_1
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.414
fur_2
Ferric uptake regulation protein.
  
  
 0.414
perR_2
Peroxide-responsive repressor PerR; Belongs to the Fur family.
  
  
 0.414
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC.
  
  
 0.404
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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