Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
livF_1High-affinity branched-chain amino acid transport ATP-binding protein LivF. (236 aa)    
Predicted Functional Partners:
BraE1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
livH_1
High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
AQS01483.1
Leu/Ile/Val-binding protein homolog 3 precursor.
 
 
 0.996
lptB_2
Lipopolysaccharide export system ATP-binding protein LptB.
 
 
0.994
AQS01488.1
Leu/Ile/Val-binding protein homolog 3 precursor.
 
 
 0.987
AQS01486.1
Leucine/isoleucine/valine transporter permease subunit; Belongs to the binding-protein-dependent transport system permease family.
  
 0.984
lptB_3
Lipopolysaccharide export system ATP-binding protein LptB.
 
 
0.976
livF_2
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
  
  
 
0.900
livH_2
High-affinity branched-chain amino acid transport system permease protein LivH.
 
  
 0.880
fliM
Flagellar motor switch protein FliM.
    
   0.470
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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