STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kefFGlutathione-regulated potassium-efflux system ancillary protein KefF. (193 aa)    
Predicted Functional Partners:
fldA_1
Flavodoxin; Low-potential electron donor to a number of redox enzymes; Belongs to the flavodoxin family.
    
 0.909
rebM_1
demethylrebeccamycin-D-glucose O-methyltransferase.
     
 0.901
nspC
Carboxynorspermidine/carboxyspermidine decarboxylase.
    
 0.751
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
 0.751
AQR99769.1
Putative nicotinate phosphoribosyltransferase; Belongs to the NAPRTase family.
 
  
 0.627
cdr_1
Coenzyme A disulfide reductase; Belongs to the sulfur carrier protein TusA family.
   
  
 0.546
asD
Bifunctional aspartate aminotransferase and L-aspartate beta-decarboxylase.
   
    0.470
aspC
Aspartate aminotransferase.
   
    0.470
dapL
LL-diaminopimelate aminotransferase.
   
    0.470
patA_1
Putative N-acetyl-LL-diaminopimelate aminotransferase.
   
    0.470
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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