STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctfBButyrate--acetoacetate CoA-transferase subunit B. (221 aa)    
Predicted Functional Partners:
ctfA
Butyrate--acetoacetate CoA-transferase subunit A.
 0.999
adc
Acetoacetate decarboxylase; Catalyzes the conversion of acetoacetate to acetone and carbon dioxide; Belongs to the ADC family.
    
 0.981
thlA
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.971
adhE_1
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.957
yhfS
Putative acetyl-CoA C-acetyltransferase YhfS; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.955
buk2_1
Butyrate kinase 2; Belongs to the acetokinase family.
     
 0.937
buk2_2
Butyrate kinase 2; Belongs to the acetokinase family.
     
 0.937
acdA_1
acyl-CoA dehydrogenase.
  
 
 0.916
acdA_3
acyl-CoA dehydrogenase.
  
 
 0.916
pta_1
Phosphate acetyltransferase.
  
 
 0.914
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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