STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01589.1Transcriptional repressor DicA. (343 aa)    
Predicted Functional Partners:
AQS01418.1
Hypothetical protein.
   
 
 0.689
AQS01419.1
Hypothetical protein.
   
 
 0.689
AQS00194.1
Outer membrane-specific lipoprotein transporter subunit LolC.
  
    0.558
AQS00191.1
FtsX-like permease family protein.
  
    0.557
exoA
Exodeoxyribonuclease.
   
  
 0.415
AQS01588.1
PD-(D/E)XK nuclease family transposase.
  
    0.415
AQS01591.1
HDOD domain protein.
 
   
 0.414
rsxB_5
Electron transport complex subunit RsxB.
 
     0.406
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.