Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQS01734.1ABC-2 family transporter protein. (419 aa)    
Predicted Functional Partners:
yxlF_8
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.783
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
 0.723
AQR98824.1
ABC-2 family transporter protein.
  
     0.681
yxlF_6
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.662
AQR98825.1
ABC-2 family transporter protein.
  
     0.649
yxlF_4
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.645
yxlF_7
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.638
yxlF_9
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.637
yxlF_3
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.631
yxlF_5
Putative ABC transporter ATP-binding protein YxlF.
 
 
 0.612
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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