STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01741.1Hypothetical protein. (306 aa)    
Predicted Functional Partners:
mta_2
HTH-type transcriptional activator mta.
 
     0.849
AQS00338.1
Transcriptional regulator PadR-like family protein.
  
     0.674
AQS01601.1
Transcriptional regulator PadR-like family protein.
  
     0.670
AQS01739.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
 
     0.561
rob_4
Right origin-binding protein.
 
     0.493
AQR98824.1
ABC-2 family transporter protein.
  
     0.464
AQS00278.1
Hypothetical protein.
  
     0.460
AQS01136.1
Hypothetical protein.
 
     0.453
AQS01737.1
Hypothetical protein.
 
     0.449
adhR_2
HTH-type transcriptional regulator AdhR.
       0.434
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.