STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01839.1Putative ABC transporter ATP-binding protein. (580 aa)    
Predicted Functional Partners:
phnC
Phosphate-import ATP-binding protein PhnC; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
     
0.878
ecfA1_2
Energy-coupling factor transporter ATP-binding protein EcfA1.
 
     
0.850
AQS01840.1
Putative multidrug export ATP-binding/permease protein.
 
   
0.839
artM_1
Arginine transport ATP-binding protein ArtM.
 
     
0.754
apxIB
Toxin RTX-I translocation ATP-binding protein.
 
 
  
0.662
lagD_1
lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
  
0.652
lolD_5
Lipoprotein-releasing system ATP-binding protein LolD.
     
0.650
lagD_2
lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
  
0.648
lagD_4
lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
  
0.642
lagD_3
lactococcin-G-processing and transport ATP-binding protein LagD.
   
   0.583
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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