STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01851.1ABC-2 family transporter protein. (242 aa)    
Predicted Functional Partners:
skfE
SkfA peptide export ATP-binding protein SkfE.
  
  
 0.846
AQS00203.1
CAAX amino terminal protease self- immunity.
 
  
 0.592
hydA
Periplasmic hydrogenase large subunit.
  
  
 0.503
AQS01576.1
Ferredoxin.
  
  
 0.502
AQS02510.1
Ferredoxin.
  
  
 0.502
frp
NADPH-flavin oxidoreductase.
  
  
 0.499
AQR99451.1
Putative NAD(P)H nitroreductase.
  
  
 0.499
nfrA2_1
FMN reductase.
  
  
 0.499
AQR99707.1
Nitroreductase A.
  
  
 0.499
nfrA2_2
FMN reductase.
  
  
 0.499
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.