STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01883.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
AQS00578.1
Hypothetical protein.
  
     0.742
pipB2_2
Secreted effector protein pipB2.
  
     0.561
yjjK_1
Putative ABC transporter ATP-binding protein YjjK.
  
     0.528
ywaC
GTP pyrophosphokinase YwaC.
  
     0.512
YfkE
Ca(2+)/H(+) antiporter; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.
  
    0.499
AQS01498.1
Putative lyase.
  
     0.476
AQS02510.1
Ferredoxin.
  
     0.450
AQS00068.1
Hypothetical protein.
  
     0.447
AQS00407.1
Hypothetical protein.
  
     0.431
AQS01468.1
Hypothetical protein.
  
     0.415
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.