STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macAMacrolide export protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (445 aa)    
Predicted Functional Partners:
mdtC
Multidrug resistance protein MdtC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.982
swrC_2
Swarming motility protein SwrC.
 
 0.898
swrC_1
Swarming motility protein SwrC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.897
macB_5
Macrolide export ATP-binding/permease protein MacB.
  
 
 0.890
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.881
macB_1
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.873
macB_2
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.789
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
 
 
 0.787
lolD_5
Lipoprotein-releasing system ATP-binding protein LolD.
 
 
 0.769
yxdM
ABC transporter permease protein YxdM.
  
 
 0.730
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.