STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS01921.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 0.998
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.940
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.940
atpB
ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.
   
  
 0.908
ptrA_1
Protease 3 precursor; Belongs to the peptidase M16 family.
    
 0.851
ptrA_2
Protease 3 precursor.
    
 0.851
AQS02025.1
Insulinase.
    
 0.851
AQS01576.1
Ferredoxin.
  
 
 0.824
AQS02510.1
Ferredoxin.
  
 
 0.824
hndD
NADP-reducing hydrogenase subunit HndC.
   
 
 0.818
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.