Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQS01922.1PGL/p-HBAD biosynthesis glycosyltransferasec. (441 aa)    
Predicted Functional Partners:
srfAA
Surfactin synthase subunit 1.
 
  
 0.837
tycC
Tyrocidine synthase 3.
 
  
 0.834
grsB_2
Gramicidin S synthase 2.
 
  
 0.737
mbtB_2
Phenyloxazoline synthase MbtB.
 
  
 0.691
nisC
Nisin biosynthesis protein NisC.
  
     0.655
plc_1
1-phosphatidylinositol phosphodiesterase precursor.
  
  
 0.628
lgrE
Linear gramicidin dehydrogenase LgrE.
 
  
 0.543
cocE
Cocaine esterase.
  
     0.484
mbtB_1
Phenyloxazoline synthase MbtB.
 
  
 0.483
leuS
leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.478
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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