Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQS01931.1BFD-like [2Fe-2S] binding domain protein. (59 aa)    
Predicted Functional Partners:
mmgC_1
acyl-CoA dehydrogenase.
  
 
 0.705
hrb
High molecular weight rubredoxin.
  
 
 0.653
hmp
Flavohemoprotein.
  
  
 0.638
rubR2
Rubredoxin-2.
  
 
 0.634
nasF
uroporphyrinogen-III C-methyltransferase.
  
  
 0.589
padI
NADH-dependent phenylglyoxylate dehydrogenase subunit beta.
   
 
 0.500
dmsB
Anaerobic dimethyl sulfoxide reductase chain B.
   
 
 0.500
AQR99909.1
Bifunctional UGMP family protein/serine/threonine protein kinase.
 
    0.462
adhE_1
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
  
 0.458
hcp_1
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.430
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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