STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
norVAnaerobic nitric oxide reductase flavorubredoxin. (410 aa)    
Predicted Functional Partners:
padH
NADH-dependent phenylglyoxylate dehydrogenase subunit epsilon.
 
  
 0.685
rubR2
Rubredoxin-2.
 
  
 0.679
dfx
Desulfoferrodoxin.
  
 0.612
hmp
Flavohemoprotein.
  
  
 0.573
scdA
Iron-sulfur cluster repair protein ScdA; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
 
  
 0.572
rbr
Rubrerythrin.
 
  
 0.567
hrb
High molecular weight rubredoxin.
  
 0.534
fprA_1
Nitric oxide reductase.
 
  
0.497
AQR98764.1
Bacteriohemerythrin.
  
  
 0.432
AQR99711.1
Bacteriohemerythrin.
  
  
 0.432
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.