Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
mglAGalactose/methyl galactoside import ATP-binding protein MglA. (509 aa)    
Predicted Functional Partners:
YufQ
Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
YufP
Beta-methylgalactoside transporter inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.998
tmpC
Membrane lipoprotein TmpC precursor.
 
 
 0.993
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
 
  
 0.704
AQS01512.1
Hypothetical protein.
   
    0.499
deoD
Purine nucleoside phosphorylase DeoD-type.
       0.442
cinA_2
Putative competence-damage inducible protein; Belongs to the CinA family.
       0.401
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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