STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS02027.1Hypothetical protein. (45 aa)    
Predicted Functional Partners:
AQS02026.1
Hypothetical protein; Anaerobic sulfatase-maturating enzyme homolog YdeM.
 
 
 
 0.976
CcpM
Anaerobic sulfatase-maturating enzyme.
 
 
 
 0.853
hemZ
Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ.
 
     0.528
dnaC_2
DNA replication protein DnaC.
  
     0.523
AQS00931.1
Hypothetical protein.
  
     0.519
alkA
DNA-3-methyladenine glycosylase.
  
     0.490
AQS02025.1
Insulinase.
       0.479
AQR99833.1
Transcriptional activator FtrB.
  
     0.470
secD
Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
     
 0.463
cpdA_2
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA.
  
     0.425
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.