STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknKSerine/threonine-protein kinase PknK. (822 aa)    
Predicted Functional Partners:
Hsp
18 kDa heat shock protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.587
AQS02580.1
Hsp20/alpha crystallin family protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.587
AQS00036.1
Metallo-beta-lactamase superfamily protein.
  
     0.539
AQS01533.1
CGGC domain protein.
  
     0.479
AQS01696.1
Hypothetical protein.
  
     0.402
XkdT1
Hypothetical protein.
  
     0.400
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.