STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bceB_2Bacitracin export permease protein BceB. (675 aa)    
Predicted Functional Partners:
yxdL_3
ABC transporter ATP-binding protein YxdL.
 
 
 0.986
yxdL_2
ABC transporter ATP-binding protein YxdL.
 
 
 0.943
graS_2
Sensor histidine kinase GraS.
 
  
 0.905
yxdL_1
ABC transporter ATP-binding protein YxdL.
 
 
 0.869
graS_1
Sensor histidine kinase GraS.
 
  
 0.852
graR_2
Response regulator protein GraR.
 
  
 0.791
macB_5
Macrolide export ATP-binding/permease protein MacB.
  
 
 0.785
cysA
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.
  
 
 0.758
lolD_1
Lipoprotein-releasing system ATP-binding protein LolD.
  
 
 0.726
bceA
Bacitracin export ATP-binding protein BceA.
  
 
 0.726
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.