STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheA_6Chemotaxis protein CheA. (680 aa)    
Predicted Functional Partners:
cheW_7
Chemotaxis protein CheW.
 
 0.997
cheB_5
Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 0.996
cheV
Chemotaxis protein CheV.
 
 0.995
cheW_6
Chemotaxis protein CheW.
 
 0.995
cheW_1
Chemotaxis protein CheW.
 
 0.987
cheW_4
Chemotaxis protein CheW.
 
 0.987
cheW_2
Chemotaxis protein CheW.
 0.986
cheW_3
Chemotaxis protein CheW.
 
 0.986
cheW_5
Chemotaxis protein CheW.
 
 0.986
fliN
Flagellar motor switch protein FliN.
 
 
 0.984
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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