STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmsBAnaerobic dimethyl sulfoxide reductase chain B. (148 aa)    
Predicted Functional Partners:
dmsA
Dimethyl sulfoxide reductase DmsA precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.990
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 0.882
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.736
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.736
mobB
Molybdopterin-guanine dinucleotide biosynthesis adapter protein.
 
     0.716
tuf_1
Elongation factor Tu.
  
 
 0.701
tuf_2
Elongation factor Tu.
  
 
 0.701
moeA
Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
   
 0.628
narT
Putative nitrate transporter NarT.
 
   
 0.619
AQR99074.1
Hypothetical protein.
   
    0.585
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.