STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmsADimethyl sulfoxide reductase DmsA precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1001 aa)    
Predicted Functional Partners:
dmsB
Anaerobic dimethyl sulfoxide reductase chain B.
 
 0.990
padI
NADH-dependent phenylglyoxylate dehydrogenase subunit beta.
 
 
 0.976
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 
 0.888
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.806
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.806
AQS01023.1
F420H2 dehydrogenase subunit F.
  
 
 0.794
tuf_1
Elongation factor Tu.
   
 
 0.777
tuf_2
Elongation factor Tu.
   
 
 0.777
mobA
Putative molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
 
   
 0.772
moeA
Molybdopterin molybdenumtransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
  
 0.765
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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