Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ohrR_3Organic hydroperoxide resistance transcriptional regulator. (136 aa)    
Predicted Functional Partners:
ohrR_1
Organic hydroperoxide resistance transcriptional regulator.
  
     0.676
AQS02231.1
Hypothetical protein.
       0.498
acdA_3
acyl-CoA dehydrogenase.
  
  
 0.450
opuCB
Glycine betaine/carnitine/choline transport system permease protein OpuCB.
  
  
 0.443
mhqR
HTH-type transcriptional regulator MhqR.
  
     0.424
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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