STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacE_2PTS system lactose-specific EIICB component. (564 aa)    
Predicted Functional Partners:
lacF
Lactose-specific phosphotransferase enzyme IIA component.
 
 0.999
licA
Lichenan-specific phosphotransferase enzyme IIA component.
 
 
 0.996
gmuA
Oligo-beta-mannoside-specific phosphotransferase enzyme IIA component.
 
 
 0.996
lacG
6-phospho-beta-galactosidase.
 
 
 0.994
cbgA
Beta-galactosidase.
  
 
 0.929
ptsH
Phosphocarrier protein HPr.
    
 0.922
licR
Putative licABCH operon regulator.
 
  
 0.913
lacC_1
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.868
lacC_2
Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.868
licB_2
Lichenan-specific phosphotransferase enzyme IIB component.
 
  
 0.850
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.