STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pglFUDP-N-acetyl-alpha-D-glucosamine C6 dehydratase. (621 aa)    
Predicted Functional Partners:
tuaE
Teichuronic acid biosynthesis protein TuaE.
  
  
 0.890
cap8A_2
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
  
 0.772
AQS02313.1
Glycosyl transferases group 1.
  
  
 0.742
arnB_1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.739
btrR
L-glutamine:2-deoxy-scyllo-inosose aminotransferase.
 
  
 0.649
epsJ_1
Putative glycosyltransferase EpsJ.
 
  
 0.635
arnB_2
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase.
 
  
 0.620
fdtB_1
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.610
fdtB_2
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.610
cap8A_1
Capsular polysaccharide type 8 biosynthesis protein cap8A.
 
  
 0.592
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.