STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS02313.1Glycosyl transferases group 1. (836 aa)    
Predicted Functional Partners:
rffG
dTDP-glucose 4,6-dehydratase 2.
 
  
 0.951
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.926
arnB_2
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase.
  
  
 0.924
grsB_2
Gramicidin S synthase 2.
  
 
 0.922
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.902
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.902
lpxD
UDP-3-O-acylglucosamine N-acyltransferase.
  
  
 0.876
barA_1
Signal transduction histidine-protein kinase BarA.
  
 
 0.864
sunS_2
SPBc2 prophage-derived glycosyltransferase SunS.
 
 0.861
AQS00274.1
UvrD/REP helicase.
  
 
 0.850
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.