STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpQ1Putative glycerophosphoryl diester phosphodiesterase 1. (324 aa)    
Predicted Functional Partners:
pldB_1
Lysophospholipase L2.
    
 0.915
pldB_2
Lysophospholipase L2.
    
 0.915
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
     
  0.900
eutB
Ethanolamine ammonia-lyase heavy chain.
     
  0.900
EutA
Reactivating factor for ethanolamine ammonia lyase.
     
  0.900
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.783
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.651
AQS00445.1
5' nucleotidase, deoxy (pyrimidine), cytosolic type C protein; Belongs to the 5'(3')-deoxyribonucleotidase family.
   
    0.528
pstA
Phosphate transport system permease protein PstA.
  
  
 0.527
AQR99454.1
Hypothetical protein.
    
 
 0.499
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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