Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cap8A_2Capsular polysaccharide type 8 biosynthesis protein cap8A. (226 aa)    
Predicted Functional Partners:
ywqD_2
Tyrosine-protein kinase YwqD.
 
 0.995
ywqE
Tyrosine-protein phosphatase YwqE.
 
 
 0.991
ywqD_1
Tyrosine-protein kinase YwqD.
 
 0.985
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.975
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
 
  
 0.753
wecA_2
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase.
 
  
 0.751
wecA_1
UDP-N-acetylgalactosamine-undecaprenyl-phosphate N-acetylgalactosaminephosphotransferase.
 
  
 0.749
AQS02313.1
Glycosyl transferases group 1.
  
  
 0.738
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.728
pseB
UDP-N-acetylglucosamine 4,6-dehydratase.
  
  
 0.682
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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