Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
pepO_2Neutral endopeptidase. (705 aa)    
Predicted Functional Partners:
macA
Macrolide export protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.637
macB_5
Macrolide export ATP-binding/permease protein MacB.
  
 
 0.606
AQR98536.1
Peptidase family M50.
  
 
 0.589
emrK_1
Putative multidrug resistance protein EmrK; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.589
AQR98372.1
Hypothetical protein.
  
 
 0.572
AQR98514.1
HlyD family secretion protein.
  
 
 0.572
mdtN_1
Multidrug resistance protein MdtN.
  
 
 0.572
hlyD
Hemolysin secretion protein D, chromosomal.
  
 
 0.572
emrK_2
Putative multidrug resistance protein EmrK.
  
 
 0.572
mdtN_2
Multidrug resistance protein MdtN.
  
 
 0.572
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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