STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS02413.1Keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase. (224 aa)    
Predicted Functional Partners:
glcA
Glycolate permease GlcA; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
  
  
 0.848
GlcD1
Putative FAD-linked oxidoreductase.
  
 0.753
GlcD2
Putative FAD-linked oxidoreductase.
  
 0.753
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.657
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
  
 0.657
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.641
puuB
Gamma-glutamylputrescine oxidoreductase.
  
 
 0.580
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
  
 0.571
AQR99215.1
Serine-pyruvate aminotransferase.
  
 0.571
AQR98894.1
NADH oxidase.
  
  
 0.522
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.