STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS02435.1glmZ(sRNA)-inactivating NTPase; Displays ATPase and GTPase activities. (294 aa)    
Predicted Functional Partners:
AQS02434.1
Gluconeogenesis factor; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
  
 0.968
whiA
Putative sporulation transcription regulator WhiA; Involved in cell division and chromosome segregation.
 
  
 0.892
rng
Ribonuclease G.
 
 
 
 0.808
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
 
   
 0.664
yvyD
Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
 
  
 0.657
AQS02432.1
Stress responsive A/B barrel domain protein.
       0.634
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.631
fruA_3
PTS system fructose-specific EIIABC component.
  
  
 0.613
pbpA
Penicillin-binding protein A.
 
     0.589
dnaE
DNA polymerase III subunit alpha.
       0.535
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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