STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agrAAccessory protein regulator protein A. (242 aa)    
Predicted Functional Partners:
citS
Sensor protein CitS.
 
 
 0.998
AQR98888.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.962
AQR98771.1
Sensory histidine kinase DcuS.
 
 
 0.955
dpiB
Sensor histidine kinase DpiB.
 
 
 0.918
agrB_2
Accessory protein regulator protein B.
 
  
 0.911
cusS
Sensor kinase CusS.
  
 
 0.906
ypdA_2
Sensor histidine kinase YpdA.
 
 
 0.598
proA
Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.570
AQS02558.1
Hypothetical protein.
       0.550
ypdA_1
Sensor histidine kinase YpdA.
 
  
 0.468
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.