STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS02613.1dUTPase. (158 aa)    
Predicted Functional Partners:
AQR99747.1
Hypothetical protein.
  
     0.744
bepA
Beta-barrel assembly-enhancing protease.
 
     0.721
AQR98559.1
Putative RNA polymerase sigma factor SigI.
 
    0.719
AQR98485.1
Tetratricopeptide repeat protein.
 
     0.672
AQS01262.1
Hypothetical protein.
  
     0.665
AQS02615.1
Metal-dependent hydrolase.
 
     0.661
AQR98838.1
Hypothetical protein.
 
     0.656
AQS02168.1
Helix-turn-helix domain protein.
  
     0.655
AQR99421.1
O-antigen ligase.
  
     0.652
AQS02241.1
Hypothetical protein.
  
     0.648
Your Current Organism:
Clostridium saccharobutylicum
NCBI taxonomy Id: 169679
Other names: ATCC BAA-117, C. saccharobutylicum, Clostridium saccharobutylicum Keis et al. 2001, DSM 13864, strain NCP 262
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.