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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQS72824.1Phenol 2-monooxygenase; Catalyzes the formation of catechol from phenol; Derived by automated computational analysis using gene prediction method: Protein Homology. (637 aa)    
Predicted Functional Partners:
hpaD
3,4-dihydroxyphenylacetate 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.965
AQS72488.1
Phenol 2-monooxygenase; Catalyzes the formation of catechol from phenol; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.904
benD-2
1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.827
AQS72486.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.745
AQS72481.1
2-dehydro-3-deoxyglucarate aldolase; Cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.
 
     0.669
AQS72823.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.608
hpaH
2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.566
AQS73672.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.525
AQS73859.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.525
AQS74895.1
SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.525
Your Current Organism:
Corynebacterium ammoniagenes
NCBI taxonomy Id: 1697
Other names: ATCC 6871, Bacterium ammoniagenes, Brevibacterium ammoniagenes, Brevibacterium sp. NCIM 2268, C. ammoniagenes, CCUG 38796, CIP 101283, Corynebacterium ammoniigenes, DSM 20306, IFO 12612, NBRC 12612, NCCB 60030, NCIB 8143, NCIB:8143, NCIMB 8143, VKM B-672
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