STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKX44031.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)    
Predicted Functional Partners:
AKX44030.1
Peptidase S54; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.895
msrB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.
  
    0.891
AKX44032.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.799
AKX44029.1
Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.762
AKX43863.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
ppnK
Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
     0.742
AKX44484.1
Succinate dehydrogenase; Membrane-anchoring subunit of succinate dehydrogenase (SDH).
  
    0.714
AKX44110.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
pepN
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.692
AKX45889.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
Your Current Organism:
Oblitimonas alkaliphila
NCBI taxonomy Id: 1697053
Other names: CCUG 67636, DSM 100830, O. alkaliphila, Oblitimonas alkaliphila Drobish et al. 2016, Pseudomonadaceae bacterium B4199, Pseudomonadaceae bacterium C6819, Pseudomonadaceae bacterium C6918, Pseudomonadaceae bacterium D2441, Pseudomonadaceae bacterium D3318, Pseudomonadaceae bacterium E1086, Pseudomonadaceae bacterium E1148, Pseudomonadaceae bacterium E5571, bacterium B4199, bacterium C6819, bacterium C6918, bacterium D2441, bacterium D3318, bacterium E1086, bacterium E1148, bacterium E5571, strain B4199
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