AIQ62400.1 protein (Paenibacillus stellifer)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AIQ62400.1

Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (279 aa)

Predicted Functional Partners:

AIQ62402.1

0.999

AIQ62401.1

0.995

AIQ62399.1

0.990

AIQ62092.1

0.980

AIQ64271.1

0.976

AIQ63485.1

0.966

glnQ

0.866

AIQ62093.1

0.864

AIQ63486.1

0.849

AIQ62404.1

0.611

Your Current Organism:

Paenibacillus stellifer

NCBI taxonomy Id: 169760
Other names: CCUG 45566, DSM 14472, P. stellifer, Paenibacillus stellifer Suominen et al. 2003, strain IS 1

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIQ62092.1	AIQ62093.1	PSTEL_02090	PSTEL_02095	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIQ62092.1	AIQ62399.1	PSTEL_02090	PSTEL_04050	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
AIQ62092.1	AIQ62400.1	PSTEL_02090	PSTEL_04055	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.980
AIQ62092.1	AIQ62401.1	PSTEL_02090	PSTEL_04060	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
AIQ62092.1	AIQ62402.1	PSTEL_02090	PSTEL_04065	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.476
AIQ62092.1	AIQ63485.1	PSTEL_02090	PSTEL_10750	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.472
AIQ62092.1	AIQ63486.1	PSTEL_02090	PSTEL_10755	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
AIQ62092.1	AIQ64271.1	PSTEL_02090	PSTEL_15440	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.626
AIQ62092.1	glnQ	PSTEL_02090	PSTEL_15435	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
AIQ62093.1	AIQ62092.1	PSTEL_02095	PSTEL_02090	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIQ62093.1	AIQ62400.1	PSTEL_02095	PSTEL_04055	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.864
AIQ62093.1	AIQ62401.1	PSTEL_02095	PSTEL_04060	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
AIQ62093.1	AIQ62402.1	PSTEL_02095	PSTEL_04065	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.948
AIQ62093.1	AIQ63485.1	PSTEL_02095	PSTEL_10750	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.938
AIQ62093.1	AIQ63486.1	PSTEL_02095	PSTEL_10755	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AIQ62093.1	AIQ64271.1	PSTEL_02095	PSTEL_15440	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arginine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.979
AIQ62399.1	AIQ62092.1	PSTEL_04050	PSTEL_02090	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.930
AIQ62399.1	AIQ62400.1	PSTEL_04050	PSTEL_04055	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
AIQ62399.1	AIQ62401.1	PSTEL_04050	PSTEL_04060	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AIQ62399.1	AIQ62402.1	PSTEL_04050	PSTEL_04065	Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995

page 1 of 5

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2023

Credits

Access

Info

About