STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ63029.1Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)    
Predicted Functional Partners:
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.902
AIQ64933.1
Nitrilase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
AIQ65811.1
Ferredoxin--nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
  0.900
AIQ63028.1
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.879
AIQ64556.1
Nitrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.864
AIQ65619.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.864
AIQ63607.1
Nitrogenase iron-iron protein alpha chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.840
nifH-4
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.833
AIQ63608.1
Nitrogenase iron-iron protein delta chain; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.809
AIQ64574.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.799
Your Current Organism:
Paenibacillus stellifer
NCBI taxonomy Id: 169760
Other names: CCUG 45566, DSM 14472, P. stellifer, Paenibacillus stellifer Suominen et al. 2003, strain IS 1
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