STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIQ65874.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)    
Predicted Functional Partners:
AIQ65875.1
Acylneuraminate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.903
AIQ65873.1
N-acetylneuraminate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.782
AIQ65877.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.774
AIQ65871.1
Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.737
AIQ65878.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.639
AIQ65260.1
UDP-N-acetylglucosamine 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.530
AIQ65879.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.424
AIQ65876.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.412
AIQ64915.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.405
Your Current Organism:
Paenibacillus stellifer
NCBI taxonomy Id: 169760
Other names: CCUG 45566, DSM 14472, P. stellifer, Paenibacillus stellifer Suominen et al. 2003, strain IS 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.