Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIQ61946.1 | AIQ66187.1 | PSTEL_01210 | PSTEL_26805 | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.428 |
AIQ65902.1 | AIQ66187.1 | PSTEL_25120 | PSTEL_26805 | UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.472 |
AIQ66142.1 | AIQ66187.1 | PSTEL_26535 | PSTEL_26805 | Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
AIQ66186.1 | AIQ66187.1 | PSTEL_26800 | PSTEL_26805 | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.540 |
AIQ66187.1 | AIQ61946.1 | PSTEL_26805 | PSTEL_01210 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family. | 0.428 |
AIQ66187.1 | AIQ65902.1 | PSTEL_26805 | PSTEL_25120 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.472 |
AIQ66187.1 | AIQ66142.1 | PSTEL_26805 | PSTEL_26535 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.400 |
AIQ66187.1 | AIQ66186.1 | PSTEL_26805 | PSTEL_26800 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.540 |
AIQ66187.1 | recF | PSTEL_26805 | PSTEL_00020 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.459 |
AIQ66187.1 | sepF | PSTEL_26805 | PSTEL_19410 | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.414 |
recF | AIQ66187.1 | PSTEL_00020 | PSTEL_26805 | Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
recF | sepF | PSTEL_00020 | PSTEL_19410 | Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.475 |
sepF | AIQ66187.1 | PSTEL_19410 | PSTEL_26805 | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.414 |
sepF | recF | PSTEL_19410 | PSTEL_00020 | Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. | 0.475 |